+Marker Data: gg3756_1472

Crop eggplant
Population LWAE2012
Linkage Group E_03
Marker Type SNP
Map Position 2.265
Annotation
Source Name FKO03-01.167.C2
Source Type 43k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method GoldenGate
454-Contig_ID eggplant_rep_c3756
454-Contig_seq (unpadded) ATAAGATTCCAATGAACCCCCTAAATACTATACGGCTCTAACACTGGCCACCAAATATATTATGTGTACATATATGTTACGACATAAAACATATTAATGTGGATATTCATTTTACAACATAAAACCATTTTCACCTCAAAATAAAGTGAAATAATTACAATAGCACACATGGCCACCAAAAACANACAAAAAANTTTAAAANATTACAACAAAGCAATCTTAGACAATACAAAAANAGAAAACTNAAAGCAACAATGCATGATAATGCATTGAAAAGAAAGGTAAAAATAAAAANCAAAAAACACAATAATTAACNTTTTTGNAGACAATTCATGTTTCTCCAGATATAGTTTCCTGCGATGCTTCCTCCAGGGATTNTGCCTTTNTGGCTCGGGTACACAAAATGTACAAAGCAATCCAAGAGCATTGATGCATCCTAGAACAATAAGTGAGTTCTTTATTCCAATCCCCGCGGGGTATCCTGCATCGATTTTCGTGGGATCTTTGCNTTTGGGCAGCGTACAGGAATCCGTACGCTCCCACTATAGCCCCAGCCTTACCCGCAGCTGCAGAAATCCCATGACATGTTGATCGAAGCCTGGCTGGGAATATCTCAGCCGGGACCACAAATGTTGTTGCATTAGGCCCAAAATTCGCGANAGAAAANACGTGAGGGAGTACATTACCACGAACCCAATACGGTTTTCCTCCAATGTCCAATGATGGTAAGGGATTGCGATCGCGAACATGAACACCGTCATGAAGAAGAATCCCATCAATTGGATCGCGAATCTTCCAATGATGTCAATGAACGCCACGGTGAACCAGTACCCTGGCACCGTACTGCAGAGCGCAATCAAGGTTTGCGCTCTCGCAATTTTGTAAACTTCCTGAACAGCATTCATAGTTGGGGCTTTCGGGATCCATCCAACGGCGGAGAAAACATCTTTCTGGAATAGATTTTGGCTGTAGAAAGCAATGTCTANATAGAANACCAAGTGGAACACGTTCCGAATAGGTGCAATCCATGGCGTCTAACGAATTCCCACGAAAACAGACCAAATTTATTAGTTTCATCCCTGGAAATTTGTTCGATTTTTGCATCCTCNGGGGTCAATTTCAACTTGTAGCACCCTTCCCATGTCCTGCGCGGCTCTCTTGGCATCTTTCGCCACGAGAGCCGTGTAACGAGCTGTTTCGGGCATCTTCATGCGCCAGTAGTAAGTGAGGCCTGCTGGCAACGCTCCGAACATGAGAATTATACGCCAAATGTAGTCGGCTTGTGGCACGGTGGACAGAGCAGGATTTTGCGCGAAAGTGGGGGCCTTGTACGCGTGATCGAATCCAGCTGAAGTGATGAGTGCAATTATCCCACTGAACAAAATTCCGAACCCTTGCATAGCGAAAACCGCGGCTATGAACGCACCACGTGTCTTCTTGTTAGCGTATTCGGACATGATCGTGGCGAATAAAGGGTAATCGCCTCCGATACCAAATCCANAGCCAAANACCTGAAGAAACATAGCGAGGCCATAACACCCTTAGGGGTATGACCGAAGGAGAGCCCAGAAGCAACAGAACACACAANGAGAACCAAAGTCATACCATAGACCTTTTNTACGTCCCATTTNTGTCTCCGAGCCAACCGAAGAAAAGCTGGCCCGCGAGGGTGCCTACTAGGGCGACACCTGTCACGGAAGCCGAGACGACCGGAGGGAGGGTCCCGGGTTTCAATAGATCCGGTTTGGTGTAGTATATACGTCCCAGTAATTTAGTTACAAGGGAANATACTAAAGAGATCATAGGCATCAGTGAAAANATCCCATTCCAGCAATAATAATTGCTGTGAAATGGTAAAGTTGTGTTTTGGCTAAATCAAGTGCATTAAGCACTTGTAAATTATTATCCTCAACAGCCATAATGCATAAAATTATAGATTCAAAAAATTATGCACTTTCTTGATTTTGGTGAGAATTGATGAGTTGACATTTGGGAAAATTGCAACTACTTATAAGGTTTGTT
SNP_position 1472
sequence_for_GGdesign GGCNATGAACGCACCNCGTGTCTTCTTGTTAGCGTATTCNGACATGATCGTGGCGAATAA[A/G]GGGTAATCGCCTCCGATACCAAATCCA-AGCCAAA-ACCTGAAGAAACATAGCGAGGCNA
GGdesign_Final_Score 0.801
Ilmn_Id 3756_1472-0_B_R_1967850810
allele_1 A
allele_2 G
Line allele-1 allele-2
Population Linkage Group Position
LWAE2012 E_03 2.265
DB Program Definition E-Value
EST Name Species Strain