+Marker Data: SOL7317

Crop eggplant
Population LWAE2012
Linkage Group E_12
Marker Type SNP
Map Position 40.881
Annotation
Source Name SmFL33E17C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document
Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd GCAAGAGGTGTACCATCAGAACAGG
STS_primer_rev TATTTTGCAGCTTCAATTTGCGCC
amplicon_seq NNNTTCTGCTATCACTGANGTTTTGAATGACAGCTTGGAAAATGTAGCTCATTCTTTTGTTTCGCGAGCTGAAATGCAGAAAGTAAGATTTTACCCAAGATCTTATGTTGTAAAAAGTGTCCTTCTCTACTATGCTGATGATTATTTTGTGTGCATTTGCCTATGTAGTCTGAGATGGTTCAAGAAGCCAACCTTTCGAAGTTTAAGTCTGAAGTACAAAGCTCTCAGGTACAAAATTGTCATGAAACTGTGTTATTTGTGCGATTCTGGTATTCTAAAAATCTTCGTCTGTGTTAGCTGTTCGTCTAGGTATTCTCTTTGTCTTGTGCTTGGGGGAGGGTTAATGTATGCTTGTTGAATATTAGCTTGCCCTTACTCACGTCTTCTATAGGTGATTTTCTCTGCCTAGATAGACGAGTAAGCTAGCTCTGTAGACTGTTGTTGTATGTACTCCTGGAACGTATTCAATCTTGTTGTTCCCAGTTATTTTTTCAACATAATGGAAAAAAGCCATATTCAAATTGTTGTTAAGACCTGTATCCCTTAGCCATCCTACGGTACTTTGCCTTTTATTATGAGTTTGTAGATGGAGACGTAATATGCATACCAGTGATATTTTTCTTCAATGATGTCAACTGTGAGACAGATAACTGCAGTAGGAAAAGCTTTAGTTTGTTGTGAGTCGTGAAAGAATATGGAACTGTTGTTGTACTCATGAAAGTTAATTATCAAAAACCAAAAAGAAAGAAAAAGAATANGAAATTGAGCTCAGCTCATGGTGCAAAAAACATGGCATAGAGGGGAAGAGGATAAGCTATGTATATCTATTGTCATCATATGACAAGTATAATGGTTAATTCTTCTACCTCCCACATCANGATGCTAGGGGAGATTCTATGTTGTGGTATTGAGTTTGGTTTGTCTTGGCTTTTAAAGTAACTCTTGGGTTTTCTTTCCTTGGGGGNNGGGGAGGGGNNNGTTTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACTGCTGTGGCTCATCCATANTANNCTCTNCGGATTNGTGTGANTTAGTNGCCCAAACATNAAGTGGGNATGCTNCCNNCAGCANGAGCGAATCNTTTTGGAACTGCTTAAGAATGGGCGCCCAGCTTCTTAGAAGATATTGTAGCAGTTCTTTTTGCTTCATTTACCAGGAAGCATCTTTTAGGAGGAATCAGATCATTTGCTTTAACTAATTCAGTTTGTTGGAAATCATCAACACAAGACTAATTTTCTTTGTGATAGACAATAATCCTAACGTTTTTGAAAGTGAGATAAATGTTACTAGTATATATGGCAATATTGTATTCAACACCGTATGAGACAGTTAGGAGACCAGATGTTAATTTGAATTCGCTCTTGAATGGATCTAATCCTTCCCAAAATTTCCTTAACATTGAGTGCTCAAGGAGGAAATTTTCCTCAAANCTCAGAATGTTGGACTGATGATTATTGCATAAAGGTTGTACTAATATATGTTCATGATATATATTTTTGTTCTATCCCTGAAGGAGCACTGGTTGAGTATGACATTTGGAATTTTTTACGACAAAATAATTTGTTGCAGGAACATCATTTTTCTCTGCTGCAACGTGAACTTGAAAAGCTTCGGAATGACATTGAAAAAATGCGCAGTGAACTAAGGTACAATTNNGTGTTGAAAAAATGGTTGTTACTTTTGAGTGCCAGTTTCAATAACCAACATTATTTGTTCATGCAGGTATGAGGTTGACAAGCTTACTGCTGGCCAGCGGTTGGATTTAAATCTTGAAAGAGGGTGAGTCTTGAAGAGTTTTAGATGCTAGCGAATGATTAGGTTGTTCCTTTTTCAACTCCCTGATGATTGATTCGGTCATTCTAAATTGTGCAGTCGCATCCGCGATGAGCTTGCCAATCAAAATGCAGAAACTACAAATCTTACTAATAAGCTTGATCGAGTAAGTGTTGGCTCTTGATATTTTGAGCGTGAATGTTCTTTAAACTCAATGCATTTTGTGAATATCTTTTCTTTTCTTTTGCTTGATCCATGTNNNNNNNNNNNNNNNNN
SNP_position 1362
allele_1 G
allele_2 A
ASP_primer_S GCGGGCTATATGGCAATATTGTATTCAACACCA
ASP_primer_L GCGGGCAGGGCGGCTATATGGCAATATTGTATTCAACAACG
Common_primer GCGAATTCAAATTAACATCTGGTCTCC
enzyme Native Taq
dye SYBR Green I
Line allele-1 allele-2
AE-P03 G G
LS1934 G G
Nakate Shinkuro G G
WCGR112-8 A A
Population Linkage Group Position
LW2010 E_12 43.2
LWA2010 LWA_12 39.962
LWAE2012 E_12 40.881
LWF2_2022 E_12 47.5
DB Program Definition E-Value
EST Name Species Strain