| Typing_Method |
GoldenGate
|
| 454-Contig_ID |
eggplant_rep_c6486
|
| 454-Contig_seq (unpadded) |
ATTCAACTTCAAATTTCTAACAAATTACCAATTTATTTGACATAAAAGGTCTCATTTCTTAAGTAATTCTTAAAATGAGAAGAATCGTAGATACATCGATCATTNAAAAGGCAAGAGCACCTGGTGCACTAAAGCTCCAGGAGGTATGCAGAAGGTTCTGAGAAGGGCCCAACCATAAGAATCTTTGTATGCAACCNTTACCTTACANTTTTTGCTGGAGGCTGTTTCAAGATTTGAACCCATAACCTCCAGATCATTAAANNAGATTCCTCGCGCATCGTCTATAGCAAAACTATGAATGGGAGCAAGACAAGAAACTAAAATAGATACAGGACAAAATGTCTTCCAAGATTATGTANATACAAATAAGTAGAAACTCTTCTACTCCATATATTTTATACAAACTATTTCAATCTTTGCCTTGTGGTACTTGAAGGGCTTCAAGAATTTCAACTACTTGACTCATAAGAGGCCTTTCTTTTGGGTTTTGACTGAGGCATTGATAGGCAAGAGTAGCAACCTTTACGACAGTTTTAGACGAGTATTGCACCTCGAGTCTAGGATCGAGTATCTTAAAGAGCTTCTTGTTATGATTCAGGAGTGGACGCGCCCACTCTACAAGGTTGTATTCCNCGGCTAGGCCTAGTCTTGTCGATTGCTCTCCTTCCAACGAGCATCTCAAGCAAAACAACCCCATAAGAGTACACGNTCGCTTCTGGNCTGNTTAAGTGTCCTGAATATTTCAATTTACGTCTTAGTAACGATGATTGCTTGACAAATATAAACAGAAGAATCACAAGCCATATGCACAAATGAGTGTTGATTTCTCGAGTCACTCAACTCATAGTTATGTTTTGTTCAACAAAGAAAGTGACTTTCTGATATAATAACTATTAGTTGAGCGACCATATGAGAAATCAACTTACGAAAATGAAGAGGATTATACAGAAGGCATTACATTACGCCTTTGGCTGCAGAAAACATTCCTTACTTCATCTGTATGGAATTCTTGTTATCAGATGGATGGCAAATACACAATGTGGTATAAAACATGTTTGACTATCCTTCTTTGTGAGTCTAATTAAGATAGCACAGTACGAAATGAACCAAATGAAATGGAAAAANACTNACCTCGACTCACCAGTCATGACATATTCTGGAGCGGCATAACCATAAGTACCCAAAACTCGAGTTGATACGTGAGTCTGATCTCCCATTGGACCATCTTTTGCAAGTCCAAAGTCCGAAAGCTTTGCATTGAAATCCTGCAGATCCAAATCCAAACAATGACGGGAAATGAAAGTAAGAAAAACAAATTGAAACGGAGGGAGGAGTACATAAAAGTTATAAAAGAAGTAAACACTTCAAGGGAAAGAATATACATCAGTAAAACAACATCTCACCGCATCTAACAAAATGTTTGAGGTCTTTAAGTCCCTATATATTACTGGCATATCGGCTTCGTGAAGAAAAGCAAGCCCTCTTGCAGCATCCAGAGCAACTTTCATTCTCCTCGACCATGTTAGAGTAGCACACATTCCTAAAGTAAAAGACGTCAATGAGATAGAGAAAAGTTAAATTCCCATAGAAAGAGAACTAGATATTATGATCTCTTTTAAGAAGGCTCGGACACAAAAAACAACAACTGGCATAACTTCTTATGTTCTAATTATCGTTTGTCACATAACTTGGATATGTGCTACTGCTCTTCATATGACAGTGTGAACTAATGCAAACAGCAGAAAATCAACCACAATATGAACTAATGCAAACAGCAGAAAATAGACTTAAAAGGACACATAGCCTGTAGGAAGTGAATCCACGAGTATTTGTTTCATTCACTTTTGCGCGAATCAAGATTTGTTTCACCTTTACCAATATGAACTCGCATTGATATTAAGTACTCACTTGGGTAAAGGTGTTTCTCCAAGCTGCCAGATTCCATATACTCGTAAACCAGTAGTCTATGGTCATCCTCACAACAATATCCGATCAGCTTCACCAGATTTGGATGTCGAAGCTGCCCCAAATAGATCATCTCTGCCTGNCAAAAGAAAGGAGTTAAAATAAGAAGCTGGTATCCATTAAGAGCAACAAGGTTTTTCAACTTCCCTAGCATATTCATGGCAAACTTTTGCAGCGACTTATCGTTTGGACNAAAACTTATTCTGGCAAATCAGGTCAGAATCTGATTCAGAAAATGTACTGGCAGTTTCGTCACTGTTTTGCACAAGTCTTGGATATTAATTCATATTGAGATTATTGTGAAAACCTTTAAATTATTTGAAAATATGGCACTATATCACAGAAAAATGACTAACAGTCAAGGAAATCAACTTCAAAATGAAATGTGAGTTAGGAATCTGCTCCTGAATTATCGAACCTATCTTGNCTATTGGTCGTGCACAAGGCGTTATGTGTTCTTAACAA
|
| SNP_position |
1799
|
| sequence_for_GGdesign |
CAGAAAATCAACCACAATATGAACTAATGCAAACAGCAGAAAATAGACTTAAAAGGACAC[A/G]TAGCCTGTAGGAAGTGAATCCACGAGTATTTGTTTCATTCACTTTTGCGCGAATCAAGAT
|
| GGdesign_Final_Score |
0.975
|
| Ilmn_Id |
6486_1799-0_B_R_1951736928
|
| allele_1 |
A
|
| allele_2 |
G
|
