+Marker Data: gg7544_220

Crop eggplant
Population LWAE2012
Linkage Group E_12
Marker Type SNP
Map Position 22.755
Annotation
Source Name FKO03-01.19669.C1
Source Type 43k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method GoldenGate
454-Contig_ID eggplant_rep_c7544
454-Contig_seq (unpadded) AAAATAACATTCTATTTATCAAGCAATCAAAGTGACAGTTTTGGAACACAGTGTTTCATTGGCACACGACATGGGTTCAAACCATNCCTTCCACCTAATAGTTTGCCAACTTCAAAGAACATTAATAGCACTGCCAGGAACTTCTTCAAGCATTCGTGTTAACCATGTATTATATAAAATACTAACAGATTCAAGAATAAACAGAAAGCACAGGGCATGCCACGTGTTGCAATGACAGACACAATGCCTGATCATGAATTCCAGAATTTTCACAAATATTACAAGACCGTATAAAGTTTCCAATTCATTCTACAAACAATTTACATTTTCCTCAAATTGTCTAACCTTGCTTGCAGATCACTGTCTATCCCGCCATCATCATTGTCAGTTGCCTCAGCCTGTGCAACCTTGCCTTTCGCTGCTGGAGCAGCCACCGCGGAAGAAGGAGCATTGACAAGCTGCCATTAATACANAGGACCATAAATAATTAGAGAGCATTGCAAACGTATCATATCATCAAAAATTGGTATTACAAAAGCATGGTAAAATACCTCATTGTTGACATTAATTCCAATCTCATCTAGGACCTGGTTCACCAACTCTTCAGTTTCTTCTTCTTCCTCATCCCCTTCCAAAGCATCATCAATGGCATNCTCCCATCACCTCACTCACCATCTCCATCTTTTCATTTTGCATCTCAAATTCTTGCATTATTTTCTGCAGTGCCGGCAAGTTCATCTGCCTGTTCATCTGTCCCATTGCCTTTGTAACACCTTTTCATTGCTTCACCCATAGCTTGTGTTGATTTCAAAGTCTGAAACCAATGACAACATTTGAGTATTTGGGAAAGAAAAGAAAAGAAAAGAGTTAGGAAAAGATTACTTTTTCAAGACAGCCAAATATATGAAATTGAAAATCAACCATGTGAGGAACTCTTTNATGATTCTTAAGATTGAACCCATTGTATTTCTAAAATTATGAGTTCATAGCTACTATTTATTGCAATTTNTAGTGTATTTTTGCACATATATTTATTCTCTGTGTCAAAAATAATGGGTTCAGATGAACCAGGTCCCACTATGTTGTNCCCCGTCACTGATCGAGAAGCATTCCCAATTCCATGAACTGGTGATGGGAACNTTATGGTTAAAGATTGCAGAATTAACTCCAAGGGAGAGCAGGAAGAAATCAAGGATATTGTTTTGNCAAATGTTAAGCTTTNGTAAACAACCATCCCATGTATCACAGAGGTTGTACTCTGAATAAAGGTAACACTTCCTGAAAACAGAACTGTAGAAGTAGCAACAACAAGAAAAACAATGATAATGATAATGATGTCCATAACTACCTGAATTCTGAGGGAGACACCTTGAAGTTGGGACTTAAGCTTGTAAAATTTTTCAATCTGATGTCTTGTCCTGATAAGATCTTTTGCCATCACCTTCACAGCACCCTAGAATCNAAAAAACTTNCACATCNAAAAAGGGGCTTAAGTACTCTTGCTATTCCTATATCCTTGCACTATTTATAGCCATAATACATTACTGAATTCAAGAAACNAAAAGTGACAAGATAGCTTAGTGCCTTTTTTCCAAGACTGGTGCACTTGCACTAACTGCACAGAGTAATTCTTTTGTGTATGATTATAAAGTTTTCTATTAATGATAGATTTTCTGTTCAACTAATTGCGCCAAAGAAGTCTTACTAAATACATAAGAGCATGGTGCTTTTTGGGTTTGT
SNP_position 220
sequence_for_GGdesign AACCATGTATTATATAAAATACTAACAGATTCAAGAATAAACAGAAAGCACAGGGCATGC[T/C]ACGTGTTGCAATGACAGACACAATGCCTGATCATGAATTCCAGAATTTTCACNAATATTA
GGdesign_Final_Score 0.832
Ilmn_Id 7544_220-0_B_F_1967852570
allele_1 T
allele_2 C

Line allele-1 allele-2

Population Linkage Group Position
LWAE2012 E_12 22.755

DB Program Definition E-Value

EST Name Species Strain