+Marker Data: emxA0802

Crop eggplant
Population LWAE2012
Linkage Group E_12
Marker Type SSR
Map Position 42.91
Annotation
Source Name Sme2.5_01971.1
Source Type genomic
Source Sequence TATTTAGTTTCTTGATTGCATTTCTTCTAATTTCTGGTGG TTAAGTTAGTGATGCTGTAAGTTAGTAGGCTTTTACTAAG TTAGTAGACTTCTCTGTTTTTCTGTTTTCTGTCTTTTGGA TTACTACAGCAAATTTGATTGGGACAACTATTGTATCAGT TTGAATGGTCCAGTGTGCAAATCATCCCTTCCTGAATTAT TTGGTAAGCAATGCTCTTCCTTTCATAATTCATTGATGTA GTTTGTGATCTCCTTTACATGTCTTCATCCCTTTTACATC CCTTTTACCTTAGCGAAGATGGCATTTGATGGGTCCAGGC CATTGGAGGAGAAGTCACTGGTGGAGTACATAAAATCGAC TCCTCCTTTGGTTTCAATTTTGGGCAATCAGTTCGATAAA CTTGATATCAAGGAAGTGGGTGATGAAAATCTCAACTTTG TCTATATTGTTGTTTCCCCCTCTGCTTAGATTGTCATCAA ACAGGTGGTCTTCATCTCCTTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCT TCTTGCTAGTAATACTTTGCAGGTTNNNNNNNNNNNTATA ATATTTTGCAGGTTTTGTGAGAGAGCCCAAGCTCTTATAC ATGGCGATCTCCATACTGGTTCTTTGATGGTCACTCACGA TTCAACCCAAGTAATTGACCCAGAATTTTCTTTCTATAGG CCAATGGGTTTTGATATTGGAGCATTTATTGGAAATCTAA TTCTGGCATACTTTTTCCAAGATGGATATTCCGATCCAGC TAATGACCGCAAGGTATATCTGTTGCAACATTTTTCCTTT CTATTCTCTGTTTTTTTGTTACTGCAATCTCCTTTTATAG TAAAGGTCTTTGTCCCCCCTTTTTGTTCTCTCCTAGTGCA TGATACTCTCGTCCTTGACTTTGGTGATTGCTATTCTGGG ATTAGAGTTGTACATGGCTTGCACTTCCTTAGATATAATG CTAGATTGATTGATCTGGAGAAAGTTGTGGCATATCGTGA GGCTGCTTAAGAGTT
Developer NIVTS
Document
motif (TC)23
PCR product (bp) 274
fwd primer emxA0802/F
fwd primer seq. TGTCATCAAACAGGTGGTCTTC
rev primer emxA0802/R
rev primer seq. ATGCTCCAATATCAAAACCCAT
fluor. primer emxA0802F_NED_s22
dye NED
fluor. Primer seq. NED-AGTCATCAAACAGGTGGTCTTC
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq
Line allele-1 allele-2
Population Linkage Group Position
LWAE2012 E_12 42.91
DB Program Definition E-Value
EST Name Species Strain