+Marker Data: emxC0403

Crop eggplant
Population LWAE2012
Linkage Group E_12
Marker Type SSR
Map Position 31.132
Annotation
Source Name Contig1502.1
Source Type genomic
Source Sequence CACTCTAGGGATCCAACCTTCACTAGTTTTGACCCCTTTG TATATTCTTATGTTTTTGTCTTTTTATTTTGAATAAATAC AATGACCTGTCTCTCTTGAATTTGTTTTTTTTTTTTTTTN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NCTCTGGAAGTGGAATGGACTATATATGTAAGTCAGTATT TGATATTTATATTAGAGTTCAGCTATGGAGTAAGAATGTT ATTTATGGTGGTTCATCTTCAAATTTTTTGTGATCTATAT TATGCTAGTTATAATATTCTATTGCTATCATTTTTTATAT ATATAGGTATAACTATTCAGTAGCGGAGCCATATGGTAAT CAGGGGATTCATCTGAACTCTCTTCGATCAAAAGTTATAC TATTTTTATATGGTAAAATAATATATATATATATATATAT ATATATATATATATATATATATATNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNATGTCGAACTATTCTGGATCTGCC ATTGCAACTACCTACGGTCTTAATGTGCCTATGATATAGC GCCTGGCGGGTTGTTAGCTAGTGTATATCATCTTACAAGA ATAGAGAATAGTGTGGATCAACTAGAAGAGGTATACATAA AATTTGCCTCTAGGAGGAATCCTAGAATTTTCGTCCATTT TCTAGGTTTGAAAAAAGGTTCTTCTTTATGTGTGTGTGTC TTCTTCAGTGTTTGATATCTATATTGGAGTTCAACTAATT TAGATTCGTACATTACGAAGTTCATTTTTGGAGAAACATA TAGTGCTCCCAACAATATTCTTTTGTATATATAAAGTTTG AACTT
Developer NIVTS
Document
motif (AT)22
PCR product (bp) 292
fwd primer emxC0403/F
fwd primer seq. CCATATGGTAATCAGGGGATTC
rev primer emxC0403/R
rev primer seq. GGCAGATCCAGAATAGTTCGAC
fluor. primer emxC0403F_FAM_s26
dye FAM
fluor. Primer seq. FAM-ACATATGGTAATCAGGGGATTC
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq
Line allele-1 allele-2
Population Linkage Group Position
LWAE2012 E_12 31.132
N28F2 E_12 24.1
DB Program Definition E-Value
EST Name Species Strain