+Marker Data: SOL3030

Crop eggplant
Population LW2010
Linkage Group E_01
Marker Type SNP
Map Position 132.7
Annotation
Source Name YFR05I20C
Source Type 16k_SmUnigene
Source Sequence
Developer NIVTS
Document

Typing_Method Tm-Shift
Marker_Class SOL
STS_primer_fwd ACGAGCTTTGGGTATGTCTATGCG
STS_primer_rev TTCTTCCTCTTCCTGCTGCTGTTT
amplicon_seq TGGTCTCTCTAGAGCAGGTGGGCTGATATAATGTATTGGCATGGAAGTATTGCTTTTATTCTGTATTGCTAAGTAACAATGTCATTCACTAGGAATATATGATATATTGAAAATTAGTTGAACTTCAGATCCTAATATAACCGGGGAAAGAAAAAGCGAGAGAGGGATACGTGTTTTCAAGTTTATAAATTTTCTTAGGGAAAGAAAGGATGAGATTGCCCCATGAAGCAATAAAACTGTTCATGCCTTTGAAAAAATTGTGAGTCTGCAACTTCTTTTTTTTTTTTTGAAAAGGAAAAAAACTTGAAAGTCGGCAGGGTATTCGGGATTTAACTTTTGTCTTCCCGAAAAAAAAGGTTGTAAAAGGGTTTTGGACACCCAAATAATTTGGGCCAGGGAAGGGGTTCTCTGGCACAAAATTAAGGATCTTTGTTGCAGGCTTATTCTTTCTTTTTAGGTGGTTCCCCTTTCCCAGCATTCCAAAATACCTGTAGATTGTCCTGTGTTTATTCTTGGGGGAGTTAACTCTTTTGTCATTTGGGGAAGTTGACCTACAACATCAGTAACTATTTATGGCAAGCCTGAATATGGTAACATGGAAATAAATGACATGTTATAGCTGGTTAAAACATTGATAGTTTTAAAAATTATTCATTCAGTAATATCAGTAAGTTAAACCCCTAAATAGAGCGTGTGGAAAGTATGAAGTGTTTGATTAAAGTTGAAATTTGTTTGGAAGATGTCAATATCACAGAAGGACTTGACAGTCTTGTGTGGTTAGTTAATTTTATACCTGAGATATCCATTCCTTCGGTGAATACAACTAATTTCTGAAGTACTTGATTCAAAAGAAACAACTACTTATTTCAGGAAAAAGTTGCACATTGGTTGTGCTACAAGTGCGCACAGTGAAAGATTCAGAATATCCTTGCTTAATATTTTAGACTCTAGATGATAAACATATCTGGCTGAATTTCATTGTCAACTCCAGTTCTTTTCCGTCAATAATTTCAATTCTTGATTCTCAGGTCCAACAACGATTTGAGTCACTCAAGAAGCGCAAGGATCCAGGAAGCTTTACTGTGCAAGGTAGAAATCTAACCTTAAAAAAAAGGAAGAGAAATTGATAATCAGTGTCAGCTTAGTGAATGGTTCATGCTTCCATAGGTCAAGTATGTACCTTATATGTAGCAATAGCAAAGATTGATGTGGTTTTCCTTTTTCCTCTGCATCAGATTTCAGTTTGTCATTGATTAAAAAGAAAAATTCAATGTCTGCTTTCTTAGGTAAAAGGACAGGATGTACATATTGAACTGCTATGACCATCTTCATTCGTTGTAGATTTTGATGG
SNP_position 236
allele_1 A
allele_2 G
ASP_primer_S GCGGGCCACAATTTTTTCAAAGGCATGAACAGT
ASP_primer_L GCGGGCAGGGCGGCCACAATTTTTTCAAAGGCATGAACAGC
Common_primer TTAGGGAAAGAAAGGATGAGATTGCCC
enzyme Native Taq
dye SYBR Green I

Line allele-1 allele-2
AE-P03 A A
LS1934 A A
WCGR112-8 G G

Population Linkage Group Position
LW2010 E_01 132.7
LWA2010 LWA_01 110.589
LWAE2012 E_01 110.495
LWF2_2022 E_01 41.3
NAF2 NA01 109.8

DB Program Definition E-Value

EST Name Species Strain