+Marker Data: tbm1388

Crop tomato
Population GM_RIL
Linkage Group GMRIL_06
Marker Type SSR
Map Position 69.9
Annotation
Source Name C06HBa0246P13
Source Type genomic
Source Sequence ACGGTTGCCACAGCCACAGAGATCTCAGCAGCAGTTAAAG GGTCCAAAGGATGACAAGTATGAGCTCTATGCATGATTTG AATCCCTGCATAAACATGGAATCATCAAGCATTCAACATC TTACTAACTACTCCAATAACAATAACAAGATCCTTCCATT AGCATTTTCTTCTTATCTGTTCATGATATTTTCTGAAGTT ACTTCATCTATATATGCGTTTTGCAACAAAAATAAGAAAA TCGGTCACATCTGCACAAAACAGAGGACGGACATCGTAGA TTGACAGTCCATATATATATAGTTCAATAAATGCACTAAA GTGGAACAAATGGATATACAAAATAGGTCTCATATAATTT GAAATTTAGGCATAGTTGATTGATTCATTTTCAATTTGAT AGAATAACACTCTACGTCAATAATCTCAGGGTAAAATACA ATACATATAAATACATAAATACATACATATATATACATAA ATATATACATAAATACATACATATATATATATATATATAT ATATATATATATATATATATATATTGGACCATGCAATTGT ACACTTAAACTGGCTAAGTTTCAAAAGTAGACCCAACTAT TGACTAAACAAAACTTACTTCTCCAATACCAAAATCAACC CCGTGAGCACAAAAATCACATGAAATTTCTCGATAGCTAT GATAAATAATTGAATATAAATGCAACGCAACCAACTCAGT GAATCGGTTACCGAGAAAATCATAAATCATAAACAGAAAA AGAAACTAATACATCTGAATGGTCATTTGCATTCGTAAAC CTCACGGAAAATGCAGGGCAATCAACTCAGTGATGTGAAG CCGTTATCGAGAAATCATAAATCACAAACAGAAAAGAAAC TAATGTATCTGAATCGCCATTTCCATCCGTAAACCTCAAG AAAAATGAAGCTCAATCAACTCTTTAAATCAGTTACCGAG AAAATCATAAATCAAAAACAGAAAAGAAGCTAATGCATCT GAATCGCCATTTCCATCTGTAAACCTCACAAAAAATGAAG CACAA
Developer NARO
Document
motif (AT)22
PCR product (bp) 234
fwd postlabel primer tbm1388/U
fwd postlabel primer seq ATCTCTACGTCAATAATCTCAGGG
rev postlabel primer tbm1388/L
rev postlabel primer seq GTTTGGGTTGATTTTGGTATTGGAGA
fluor. primer
dye
fluor. Primer seq.
PCR condition 94C_3min->(94C_30s->65C_60s,-1C/cyc->72C_60s)x10->(94C_30s->55C_60s->72C_60s)x30->75C_5min->10C
polymerase Roche Taq
BIN C06_06
probe Marker TGS2940
Line allele-1 allele-2
Geronimo 233 237
Momotaro 8 235 235
K03 233 233
K09 235 235
Population Linkage Group Position
GMF2 GMF2_06 62.219
GM_RIL GMRIL_06 69.9
GM_RIL_4K T06 62.571
K39_RIL K39RIL_06 43.17
DB Program Definition E-Value
EST Name Species Strain